BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F03SP1|AL426238
(773 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1549 1516 0.0
>3x_Contig1549
Length = 13677
Score = 1516 bits (761), Expect = 0.0
Identities = 767/773 (99%)
Strand = Plus / Plus
Query: 1 gatcacttgtctttgcagcagttgtacctccttcttccttagaattagcattttttttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6368 gatcacttgtctttgcagcagttgtacctccttcttccttagaattagcattttttttca 6427
Query: 61 gattgggcttcttagaaacactcttttgagagaaattcccaatattgttaattcgttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6428 gattgggcttcttagaaacactcttttgagagaaattcccaatattgttaattcgttcca 6487
Query: 121 gttctcttattttttttgttgcttcgagccctgatagcaggggcaattgcmaatccataa 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6488 gttctcttattttttttgttgcttcgagccctgatagcaggggcaattgcaaatccataa 6547
Query: 181 ggataagatgactatcgccttctttccacttttctattgcttccactccgtctttggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6548 ggataagatgactatcgccttctttccacttttctattgcttccactccgtctttggcaa 6607
Query: 241 ctttgtaagaaattccgttctttcttaaaaataatgctagaatggcttggtttatagcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6608 ctttgtaagaaattccgttctttcttaaaaataatgctagaatggcttggtttatagcgt 6667
Query: 301 tatcttctacaataagcacgttgawacgaggaaacactttatattttggaaggttgcctt 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6668 tatcttctacaataagcacgttgatacgaggaaacactttatattttggaaggttgcctt 6727
Query: 361 gcttatctaatgagggtgtggtccttctggatagtggacgaggtaattctggagacgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6728 gcttatctaatgagggtgtggtccttctggatagtggacgaggtaattctggagacgata 6787
Query: 421 ttgtctttgttaatgawatacccacttcctcttctgttaatggtttctgggctgtcaacg 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6788 ttgtctttgttaatgatatacccacttcctcttctgttaatggtttctgggctgtcaacg 6847
Query: 481 cgtaactctctggatgtggcggtgaagtttcaatattatccaaggaaatattcgcttcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6848 cgtaactctctggatgtggcggtgaagtttcaatattatccaaggaaatattcgcttcct 6907
Query: 541 catacggagaatcattgctaccttcaatatcctcaggggatacaccttttggtaatagta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6908 catacggagaatcattgctaccttcaatatcctcaggggatacaccttttggtaatagta 6967
Query: 601 gtattccagtgttattacgcgagchtkagaaacttccaaaaagacttggccgtctttgat 660
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 6968 gtattccagtgttattacgcgagcttgagaaacttccaaaaagacttggccgtctttgat 7027
Query: 661 cgggtctttcaacaacagaatcgatttcagttccctggctaatatctgagagtaggatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7028 cgggtctttcaacaacagaatcgatttcagttccctggctaatatctgagagtaggatct 7087
Query: 721 ctttttcctgtcctawagcgtccttggtgaatatacgtattggatctaaaagt 773
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7088 ctttttcctgtcctatagcgtccttggtgaatatacgtattggatctaaaagt 7140
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6300
Number of Sequences: 1807
Number of extensions: 6300
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 773
length of database: 10,358,551
effective HSP length: 16
effective length of query: 757
effective length of database: 10,329,639
effective search space: 7819536723
effective search space used: 7819536723
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)